BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009H07SP1|AL426115
(247 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig167 366 e-101
>3x_Contig167
Length = 745
Score = 366 bits (181), Expect = e-101
Identities = 228/241 (94%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 3 atatatttatatttttggaatgtaccatttaaaatattcattgtattagatctagaaata 62
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 atatatttatagttttggaatgtaccatttaaaatattcattgtattagatctagaaata 73
Query: 63 gatttattattagataatctaccttttaattgaattgatcatcctactaaatatttaaac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gatttattattagataatctaccttttaattgaattgatcatcctactaaatatttaaac 133
Query: 123 attaaaatattattagggatagtattaatattattattttcataaataatattatatwrk 182
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 134 attaaaatattattagggatagtattaatattattatcttcataaataatattatacccc 193
Query: 183 kbscccgcggctcctcccctgggattaccaggagtaggatgtccgcgggtgttattwtta 242
||||||||||||||||||||||||||||||| |||| ||||||||| |||||| |||
Sbjct: 194 cttcccgcggctcctcccctgggattaccaggag-agga-gtccgcggg-gttattatta 250
Query: 243 t 243
|
Sbjct: 251 t 251
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2960
Number of Sequences: 1807
Number of extensions: 2960
Number of successful extensions: 122
Number of sequences better than 1.0e-20: 1
length of query: 247
length of database: 10,358,551
effective HSP length: 15
effective length of query: 232
effective length of database: 10,331,446
effective search space: 2396895472
effective search space used: 2396895472
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.5 bits)